Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015899646.1_cds_XP_016449638.1_44165
CDS Infomation

[gene=LOC107774576] [db_xref=GeneID:107774576] [protein=aspartic proteinase CDR1-like] [protein_id=XP_016449638.1] [location=complement(11319..12674)] [gbkey=CDS]
Sequence

ATGAAGATGAATACTAAAGCTAGCACTCTCTTTTCTACATTAGTCTTATTAGCTTTTTTT
CACCTTTCTTTGGTTTCTTGTCGCAAAATAAAAGGCAACCATGGTGGAAACGGCTTCACT
CTTGATCTTATCCATCGTGATTCTCCTCTTTCGCCTTTCTACAACCCATCAAACCGCCTT
CGAAACGCCTTCCATCGATCATTTTCTCGGGCTTCCTTCTTCAAGAAAAATTCCTTTGCT
AGTGCTACTGACACAATCCAATCGGATATTTTTCCAATTCCAGGAGAATACCTCATGAAA
ATCTCTATTGGAACTCCACCAGTTGAAATTGTAGCTATAGCTGACACTGGTAGCGACTTA
ACATGGACACAATGTATGCCTTGCGCTAATTGTTTCCAACAATCAGCCCCTCTTTTTGAT
TCCAAACAAAGCTCTACTTATAAAACTGTGGGGTGTAACGCTGAAGAATGTACATCATTA
GGGACTTCTTCTTGTGTTAGAGGAAATATTTGTGAATATCAAATGAGTTATGGTGACCAA
TCACAAACAATTGGTGATCTTGCTTTTGAGAAATTCACATTTCCTTCTACTTCTGGAAAT
AATGTTTCCATTCCTAATGTTGTGTTTGGTTGCGGTCATGACAATAATGGCACGTTCAAT
AATTATACTTCTGGTATTATTGGATTAGGTGGTGGTGAAGTCTCAATTATCAACCAATTG
GATAAACAAATTAATGGGAAATTCTCTTATTGTTTAATCCCAATTCCATTGCAATCATCA
AATTCCAATGCCACAAGTCACATCAACTTTGGCGATAGTGCCACTGTGTCTGGCCCTAAT
GTCGTTTCAACTCCCTTGATAAAAAAGGAACCGTCTACATTCTACTATCTAAATTTGGAA
GATATTAGCGTTGGAGATAAGATAGTGGATTTCAAATCTCCTAATATTACTTCTTCTGGT
CCTGGTGATGACGGTCAAGGAAACATTATAATTGATTCTGGTACGACATTAACGTTGCTG
CCTAGTGAATTTTACTCGAGTTTGGAATCAACGTTAGTGGATTCGATCAATGCTACGAGG
AGGGATGACCCTTCTGGCACTTTTGATCTCTGTTACGAGTCTGAGAATGGTACTATCGAT
GCTCCCAAGATTGTCGCGCATTTTACAGATGCAGATTTAGAGTTGTCGCCTTCGAGCACA
TTTGCAGAAGTGGAGGAAGGTTTGGTTTGTCTTACGATAGTGCCAGCTGAGGAAGTTGCT
ATATTTGGAAACTTGGCTCAGGCCAATTTCCTAATTGGATATGATCTTGTGGCCAACAAA
ATCTCCTTCCAGCCTACAGATTGCACTAAGTACTAA

Peptide Sequence

PEP ID

XP_016449638.1
PEP Infomation

PREDICTED: aspartic proteinase CDR1-like [Nicotiana tabacum]
Sequence

MKMNTKASTLFSTLVLLAFFHLSLVSCRKIKGNHGGNGFTLDLIHRDSPLSPFYNPSNRL
RNAFHRSFSRASFFKKNSFASATDTIQSDIFPIPGEYLMKISIGTPPVEIVAIADTGSDL
TWTQCMPCANCFQQSAPLFDSKQSSTYKTVGCNAEECTSLGTSSCVRGNICEYQMSYGDQ
SQTIGDLAFEKFTFPSTSGNNVSIPNVVFGCGHDNNGTFNNYTSGIIGLGGGEVSIINQL
DKQINGKFSYCLIPIPLQSSNSNATSHINFGDSATVSGPNVVSTPLIKKEPSTFYYLNLE
DISVGDKIVDFKSPNITSSGPGDDGQGNIIIDSGTTLTLLPSEFYSSLESTLVDSINATR
RDDPSGTFDLCYESENGTIDAPKIVAHFTDADLELSPSSTFAEVEEGLVCLTIVPAEEVA
IFGNLAQANFLIGYDLVANKISFQPTDCTKY

Transcript Sequence

Gene sequence data has not been registered.